Hs07471818_cn

• Gene Symbol: ARID5A
• Assay Reference Genome Location: Chr.2:96537033 on build GRCh38
• Cytoband: 2q11.2

Target Gene Details

• Entrez Gene ID: 10865
• Gene Name: AT-rich interaction domain 5A
• Gene Aliases: MRF-1, MRF1, RP11-363D14
• Location: Chr.2:96536719-96552638 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ARID5A	NM_001319085.1			NP_001306014.1
	NM_001319087.1			NP_001306016.1
	NM_001319093.1			NP_001306022.1
	NM_001319094.1			NP_001306023.1
	NM_001319096.1			NP_001306025.1
	NM_212481.2			NP_997646.1
	XM_017003184.1			XP_016858673.1
	AK300173.1
	AK304566.1
	AK307768.1
	BM556343.1
	BX396215.2
	BX648918.1
	CR981009.1
	HY002073.1
	HY076710.1
	M62324.1			AAA36325.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2720413	Chr.2:96472591 - 96793459 on Build GRCh38	Deletion	FER1L5 LOC105373496 NEURL3 CNNM4 ARID5A KANSL3 LMAN2L
dgv607e201	Chr.2:95855884 - 97561622 on Build GRCh38	Deletion	STARD7-AS1 NEURL3 DUSP2 ASTL FAM178B ARID5A FAHD2B NCAPH LMAN2L ITPRIPL1 LOC101927053 ANKRD23 ANKRD36C SNRNP200 LOC105373496 CIAO1 ANKRD36B KANSL3 ANKRD39 ADRA2B LOC105373495 LOC100506076 STARD7 SEMA4C ANKRD36 LOC107984110 FER1L5 LOC653924 CNNM4 TMEM127 FAHD2CP CNNM3 MIR3127 LOC100506123 GPAT2
nsv1135873	Chr.2:95981454 - 97579645 on Build GRCh38	Deletion	STARD7-AS1 NEURL3 DUSP2 ASTL FAM178B ARID5A FAHD2B NCAPH LMAN2L ITPRIPL1 LOC101927053 ANKRD23 ANKRD36C SNRNP200 LOC105373496 CIAO1 ANKRD36B KANSL3 ANKRD39 ADRA2B LOC105373495 LOC100506076 STARD7 SEMA4C ANKRD36 LOC107984110 FER1L5 LOC653924 CNNM4 TMEM127 FAHD2CP CNNM3 MIR3127 LOC100506123 GPAT2
esv3425717	Chr.2:95859900 - 97515905 on Build GRCh38	Duplication	STARD7-AS1 NEURL3 DUSP2 ASTL FAM178B ARID5A FAHD2B NCAPH LMAN2L ITPRIPL1 LOC101927053 ANKRD23 ANKRD36C SNRNP200 LOC105373496 CIAO1 ANKRD36B KANSL3 ANKRD39 ADRA2B LOC105373495 LOC100506076 STARD7 SEMA4C ANKRD36 LOC107984110 FER1L5 LOC653924 CNNM4 TMEM127 FAHD2CP CNNM3 MIR3127 LOC100506123 GPAT2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
negative regulation of transcription, DNA-templated

Function(s)

DNA binding
protein binding
transcription regulatory region DNA binding