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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81888967 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07502095_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1
BU624466.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ALYREF ANAPC11
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ALYREF P4HB ARHGDIA
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion NOTUM RAC3 RFNG ASPSCR1 LRRC45 STRA13 ANAPC11 MYADML2 MAFG DCXR MAFG-AS1 PCYT2 GPS1 ALYREF SIRT7 DUS1L NPB PYCR1
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain GCGR ARL16 ASPSCR1 AATK OGFOD3 FN3K BAHCC1 UTS2R CD7 LOC105376791 DCXR MAFG-AS1 SECTM1 PPP1R27 FOXK2 SNORD134 FN3KRP NPB PDE6G HGS FASN FAAP100 LOC101929511 RAC3 NPLOC4 NARF LOC101929552 ARHGDIA STRA13 MIR3186 LINC00482 SLC25A10 MYADML2 B3GNTL1 ACTG1 MAFG TBCD P4HB TEX19 DUS1L MRPL12 LOC100130370 PYCR1 CCDC57 RAB40B NOTUM MIR4740 TSPAN10 WDR45B LOC105371925 SLC16A3 MCRIP1 CEP131 ZNF750 SLC38A10 PCYT2 GPS1 MIR6786 OXLD1 AATK-AS1 HEXDC SIRT7 MIR4525 MIR6787 CCDC137 TEPSIN RFNG LOC105371944 LRRC45 TMEM105 ANAPC11 CSNK1D LOC105376790 ALYREF FSCN2 C17orf62 C17orf89
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss NOTUM GCGR TSPAN10 ARL16 ASPSCR1 MCRIP1 DCXR MAFG-AS1 PCYT2 GPS1 MIR6786 PPP1R27 OXLD1 SIRT7 NPB PDE6G HGS FAAP100 RAC3 NPLOC4 CCDC137 RFNG ARHGDIA LRRC45 STRA13 ANAPC11 SLC25A10 MYADML2 MAFG ALYREF FSCN2 P4HB DUS1L MRPL12 PYCR1
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss NOTUM ASPSCR1 ARHGDIA ANAPC11 MYADML2 MAFG MAFG-AS1 PCYT2 ALYREF P4HB SIRT7 NPB PYCR1
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss ASPSCR1 OGFOD3 FN3K UTS2R CD7 LOC105376791 DCXR MAFG-AS1 SECTM1 PPP1R27 FOXK2 SNORD134 FN3KRP NPB FASN LOC101929511 RAC3 NARF LOC101929552 ARHGDIA STRA13 MYADML2 B3GNTL1 MAFG TBCD P4HB TEX19 DUS1L PYCR1 CCDC57 RAB40B NOTUM WDR45B SLC16A3 MCRIP1 ZNF750 PCYT2 GPS1 HEXDC SIRT7 MIR4525 MIR6787 RFNG METRNL LOC105371944 LRRC45 ANAPC11 CSNK1D LOC105376790 ALYREF C17orf62

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