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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81889143 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07502112_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1
BU624466.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ARHGDIA ALYREF P4HB
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion LRRC45 MYADML2 PYCR1 DCXR NOTUM DUS1L ALYREF RAC3 MAFG STRA13 SIRT7 NPB ASPSCR1 RFNG MAFG-AS1 ANAPC11 GPS1 PCYT2
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain SECTM1 LOC105371944 CCDC137 MYADML2 PYCR1 UTS2R LOC101929511 MIR4525 SLC16A3 B3GNTL1 TSPAN10 CSNK1D LOC105376790 FASN SLC25A10 MCRIP1 RFNG LINC00482 MIR6786 WDR45B LRRC45 NPLOC4 FN3K HGS PDE6G MIR6787 TMEM105 RAC3 MAFG-AS1 SLC38A10 ANAPC11 LOC105376791 MIR3186 PCYT2 HEXDC TBCD DCXR NOTUM DUS1L ALYREF FOXK2 CD7 FAAP100 SIRT7 ZNF750 NPB ARHGDIA ARL16 LOC101929552 NARF RAB40B GPS1 LOC105371925 AATK-AS1 C17orf89 AATK FN3KRP OXLD1 C17orf62 OGFOD3 SNORD134 GCGR PPP1R27 CCDC57 MAFG MIR4740 STRA13 ASPSCR1 TEX19 FSCN2 MRPL12 LOC100130370 TEPSIN BAHCC1 CEP131 ACTG1 P4HB
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss CCDC137 MYADML2 PYCR1 DCXR NOTUM DUS1L ALYREF TSPAN10 FAAP100 SIRT7 NPB SLC25A10 ARHGDIA MCRIP1 ARL16 RFNG MIR6786 GPS1 LRRC45 NPLOC4 OXLD1 HGS PDE6G GCGR PPP1R27 RAC3 MAFG STRA13 ASPSCR1 MAFG-AS1 FSCN2 ANAPC11 MRPL12 PCYT2 P4HB
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss MYADML2 PYCR1 NOTUM ALYREF MAFG SIRT7 NPB ASPSCR1 ARHGDIA MAFG-AS1 ANAPC11 PCYT2 P4HB
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss SECTM1 LOC105371944 MYADML2 PYCR1 UTS2R LOC101929511 MIR4525 SLC16A3 B3GNTL1 CSNK1D LOC105376790 FASN MCRIP1 RFNG WDR45B LRRC45 FN3K MIR6787 RAC3 METRNL MAFG-AS1 ANAPC11 LOC105376791 PCYT2 HEXDC TBCD DCXR NOTUM DUS1L ALYREF FOXK2 CD7 SIRT7 ZNF750 NPB ARHGDIA LOC101929552 NARF RAB40B GPS1 FN3KRP C17orf62 OGFOD3 SNORD134 PPP1R27 CCDC57 MAFG STRA13 ASPSCR1 TEX19 P4HB

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