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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81889865 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07502896_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain P4HB ALYREF ARHGDIA
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion MAFG GPS1 DUS1L MYADML2 DCXR ASPSCR1 LRRC45 ANAPC11 MAFG-AS1 NPB RFNG RAC3 SIRT7 ALYREF PYCR1 STRA13 PCYT2 NOTUM
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain LOC105376791 DUS1L FN3K HEXDC SLC38A10 OXLD1 FSCN2 ARL16 ASPSCR1 CCDC57 LOC105371944 ZNF750 TMEM105 ANAPC11 B3GNTL1 NPLOC4 MIR4525 SNORD134 LOC105371925 LINC00482 STRA13 AATK PCYT2 FAAP100 FOXK2 UTS2R LOC105376790 RAB40B FN3KRP GCGR OGFOD3 LRRC45 C17orf62 TBCD MIR3186 MAFG-AS1 RFNG PDE6G AATK-AS1 SIRT7 ALYREF CD7 MAFG GPS1 LOC101929552 MIR4740 MYADML2 MIR6786 PPP1R27 CSNK1D LOC101929511 TEPSIN MRPL12 TEX19 NPB P4HB NARF MIR6787 NOTUM TSPAN10 BAHCC1 LOC100130370 DCXR FASN WDR45B MCRIP1 C17orf89 RAC3 PYCR1 ACTG1 SECTM1 ARHGDIA CCDC137 HGS SLC16A3 SLC25A10 CEP131
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss MAFG GPS1 DUS1L MYADML2 OXLD1 FSCN2 MIR6786 ARL16 PPP1R27 ASPSCR1 MRPL12 ANAPC11 NPB NPLOC4 P4HB STRA13 PCYT2 NOTUM TSPAN10 FAAP100 DCXR GCGR MCRIP1 LRRC45 MAFG-AS1 RFNG PDE6G RAC3 SIRT7 ALYREF PYCR1 ARHGDIA CCDC137 HGS SLC25A10
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss MAFG MYADML2 ASPSCR1 ANAPC11 MAFG-AS1 NPB P4HB SIRT7 ALYREF PYCR1 ARHGDIA PCYT2 NOTUM
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss LOC105376791 DUS1L FN3K HEXDC ASPSCR1 CCDC57 LOC105371944 ZNF750 ANAPC11 B3GNTL1 MIR4525 SNORD134 STRA13 PCYT2 FOXK2 UTS2R LOC105376790 RAB40B FN3KRP OGFOD3 LRRC45 C17orf62 TBCD MAFG-AS1 RFNG SIRT7 ALYREF CD7 MAFG GPS1 LOC101929552 MYADML2 PPP1R27 CSNK1D LOC101929511 TEX19 METRNL NPB P4HB NARF MIR6787 NOTUM DCXR FASN WDR45B MCRIP1 RAC3 PYCR1 SECTM1 ARHGDIA SLC16A3

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