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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81891526 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07503994_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 1 61 NP_005773.3
BC052302.1 1 61 AAH52302.1

Target Gene Details

Entrez Gene ID:

 51529

Gene Name:

 anaphase promoting complex subunit 11

Gene Aliases:

 APC11, Apc11p, HSPC214

Location:

 Chr.17:81890790-81900533 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ANAPC11 NM_001289414.1 NP_001276343.1
AA356010.1
AW965775.1
BF435042.1 1 73
BF512771.1 1 80

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv29964 Chr.17:81891311 - 81952513 on Build GRCh38 Loss PCYT2 NOTUM ANAPC11 PYCR1 NPB ALYREF MAFG-AS1 MYADML2 SIRT7 MAFG
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion LRRC45 PCYT2 STRA13 RFNG RAC3 ANAPC11 MAFG-AS1 MYADML2 SIRT7 MAFG NOTUM ASPSCR1 DCXR PYCR1 NPB DUS1L ALYREF GPS1
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain LRRC45 LOC100130370 PPP1R27 ZNF750 ANAPC11 MIR4740 MYADML2 SIRT7 ACTG1 CCDC137 GCGR SNORD134 BAHCC1 ASPSCR1 CSNK1D DCXR TEX19 TEPSIN AATK GPS1 OGFOD3 MCRIP1 STRA13 FSCN2 MIR3186 RFNG NARF B3GNTL1 FASN FN3K SLC16A3 ARHGDIA NOTUM FN3KRP TBCD PYCR1 NPB LOC101929552 ALYREF SECTM1 P4HB FAAP100 RAB40B PCYT2 RAC3 CCDC57 MRPL12 FOXK2 MAFG NPLOC4 C17orf62 OXLD1 C17orf89 HEXDC LOC101929511 DUS1L TSPAN10 MIR6787 MIR6786 LINC00482 UTS2R CD7 LOC105371944 HGS ARL16 MAFG-AS1 PDE6G SLC25A10 CEP131 WDR45B SLC38A10 LOC105376791 MIR4525 AATK-AS1 LOC105371925 LOC105376790 TMEM105
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss LRRC45 PCYT2 PPP1R27 RAC3 ANAPC11 MRPL12 MYADML2 SIRT7 MAFG NPLOC4 CCDC137 OXLD1 GCGR ASPSCR1 DCXR DUS1L TSPAN10 GPS1 MCRIP1 MIR6786 STRA13 FSCN2 RFNG HGS ARL16 MAFG-AS1 PDE6G SLC25A10 ARHGDIA NOTUM PYCR1 NPB ALYREF P4HB FAAP100
nsv1070854 Chr.17:81890923 - 81891824 on Build GRCh38 Deletion ANAPC11 ALYREF
esv33468 Chr.17:81891535 - 81927756 on Build GRCh38 Loss PCYT2 ANAPC11 NPB ALYREF SIRT7 MAFG
nsv1118775 Chr.17:81891024 - 81891624 on Build GRCh38 Deletion ANAPC11 ALYREF
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss PCYT2 ANAPC11 MAFG-AS1 MYADML2 SIRT7 MAFG ARHGDIA NOTUM ASPSCR1 PYCR1 NPB ALYREF P4HB
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss LRRC45 PPP1R27 ZNF750 ANAPC11 MYADML2 SIRT7 SNORD134 ASPSCR1 CSNK1D DCXR TEX19 GPS1 OGFOD3 MCRIP1 STRA13 RFNG NARF B3GNTL1 FASN FN3K SLC16A3 ARHGDIA NOTUM FN3KRP TBCD PYCR1 NPB LOC101929552 ALYREF SECTM1 P4HB RAB40B PCYT2 RAC3 CCDC57 FOXK2 MAFG C17orf62 HEXDC LOC101929511 DUS1L MIR6787 UTS2R CD7 LOC105371944 MAFG-AS1 METRNL WDR45B LOC105376791 MIR4525 LOC105376790

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