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See other CHL1 CNV Assays ›
Gene Symbol
CHL1
Assay Reference Genome
Location

Chr.3:273349 on build GRCh38
Cytoband
3p26.3
Assay ID Hs07539569_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10752

Gene Name:

 cell adhesion molecule L1 like

Gene Aliases:

 CALL, L1CAM2

Location:

 Chr.3:196588-409417 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHL1 NM_001253387.1 NP_001240316.1
NM_006614.3 NP_006605.2
XM_006712938.1 XP_006713001.1
XM_006712939.3 XP_006713002.1
XM_006712940.3 XP_006713003.1
XM_011533292.1 XP_011531594.1
XM_011533294.1 XP_011531596.1
XM_011533295.1 XP_011531597.1
XM_011533296.1 XP_011531598.1
XM_017005566.1 XP_016861055.1
XM_017005567.1 XP_016861056.1
XM_017005569.1 XP_016861058.1
XM_017005570.1 XP_016861059.1
XM_017005571.1 XP_016861060.1
XM_017005572.1 XP_016861061.1
XM_017005573.1 XP_016861062.1
AB209329.1 BAD92566.1
AF002246.1 AAB60937.1
AK126878.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759122 Chr.3:29482 - 756820 on Build GRCh38 Gain+Loss CHL1-AS1 CHL1 LOC101927174 LINC01266
nsv818121 Chr.3:272855 - 283727 on Build GRCh38 Gain CHL1
esv3594872 Chr.3:36658 - 319672 on Build GRCh38 Loss CHL1 LOC101927174
esv2667629 Chr.3:39576 - 1039187 on Build GRCh38 Deletion CHL1-AS1 CHL1 LOC101927174 LINC01266 CNTN6
nsv1013825 Chr.3:256421 - 312812 on Build GRCh38 Loss CHL1
esv3575528 Chr.3:241068 - 275532 on Build GRCh38 Gain CHL1
nsv834589 Chr.3:235505 - 395503 on Build GRCh38 Gain CHL1-AS1 CHL1
dgv4608n100 Chr.3:18655 - 438490 on Build GRCh38 Gain CHL1-AS1 CHL1 LOC102723448 LOC101927174
dgv4613n100 Chr.3:52474 - 1799230 on Build GRCh38 Loss CHL1-AS1 CHL1 LOC101927174 LINC01266 CNTN6
nsv460305 Chr.3:228838 - 275462 on Build GRCh38 Loss CHL1
nsv10238 Chr.3:271826 - 285163 on Build GRCh38 Gain CHL1
dgv4614n100 Chr.3:214575 - 294771 on Build GRCh38 Gain CHL1
nsv1010970 Chr.3:188327 - 1623352 on Build GRCh38 Gain CHL1-AS1 CHL1 LOC101927174 LINC01266 CNTN6
nsv526340 Chr.3:21733 - 2305176 on Build GRCh38 Loss CHL1-AS1 CHL1 LOC102723448 LOC101927174 CNTN4 CNTN4-AS2 LINC01266 CNTN6
esv3594893 Chr.3:242814 - 379641 on Build GRCh38 Loss CHL1-AS1 CHL1
nsv428412 Chr.3:29467 - 326726 on Build GRCh38 Gain CHL1 LOC101927174
nsv589283 Chr.3:192626 - 321571 on Build GRCh38 Gain CHL1 LOC101927174
nsv999459 Chr.3:230573 - 288287 on Build GRCh38 Loss CHL1
nsv1005290 Chr.3:247092 - 949319 on Build GRCh38 Loss CHL1-AS1 CHL1 LINC01266
esv2762308 Chr.3:271980 - 285057 on Build GRCh38 Gain CHL1
esv2763731 Chr.3:243604 - 1386714 on Build GRCh38 Gain+Loss CHL1-AS1 CHL1 LINC01266 CNTN6
nsv1004600 Chr.3:244100 - 607771 on Build GRCh38 Loss CHL1-AS1 CHL1 LINC01266
dgv8152n54 Chr.3:245736 - 278518 on Build GRCh38 Loss CHL1
esv3893589 Chr.3:251309 - 275462 on Build GRCh38 Gain CHL1
esv3893591 Chr.3:264957 - 301339 on Build GRCh38 Loss CHL1
nsv589242 Chr.3:47730 - 388999 on Build GRCh38 Gain CHL1-AS1 CHL1 LOC101927174

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