At02194835_g1 Best Coverage

• Gene Symbol: CH1
• Gene Name: Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
• Gene Aliases: ARABIDOPSIS THALIANA CHLOROPHYLL A OXYGENASE, AT1G44446, ATCAO, CAO, CHLORINA 1, CHLOROPHYLL A OXYGENASE, CHLOROPHYLL B SYNTHASE, T18F15.7, T18F15_7
• Chromosome Location: Chr.1: 16848308 - 16851271 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CH1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001333230.1	NP_001321683.1	5 - 6	1016		61
	NM_103548.5	NP_175088.1	6 - 7	1149		61
	NM_202240.2	NP_973969.1	6 - 7	1102		61
	NM_202241.2	NP_973970.1	6 - 7	1102		61
GenBank mRNA	AK228645.1	-	6 - 7	1067		61
	AY128357.1	-	6 - 7	1102		61
	BT002075.1	-	6 - 7	1030		61

More Information

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

oxygenase

Gene Ontology Categories:

Process(es)

chlorophyll biosynthetic process
oxidation-reduction process

Function(s)

iron ion binding
chlorophyllide a oxygenase [overall] activity
2 iron, 2 sulfur cluster binding