At02196374_g1 Best Coverage

• Gene Symbol: SPP1
• Gene Name: Phosphatidic acid phosphatase (PAP2) family protein
• Gene Aliases: AT3G58490, AtSPP1, LPPdelta, lipid phosphate phosphatase delta, sphingoid phosphate phosphatase 1
• Chromosome Location: Chr.3: 21632812 - 21635178 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SPP1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001084839.2	NP_001078308.1	1 - 2	437		67
	NM_115711.4	NP_191408.1	1 - 2	437		67
GenBank mRNA	AB239190.1	-	1 - 2	184		67

More Information

Additional Information:

This assay is in the 5'UTR region of the NM_001084839.2 transcripts.

• Set Membership: Amplicon length less than or equal to 70, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

phosphatase

Gene Ontology Categories:

Process(es)

sphingolipid metabolic process
response to abscisic acid
phospholipid dephosphorylation
stomatal closure

Function(s)

sphingosine-1-phosphate phosphatase activity
lipid phosphatase activity