At02198707_g1 Best Coverage

• Gene Symbol: PBS3
• Gene Name: Auxin-responsive GH3 family protein
• Gene Aliases: AT5G13320, AVRPPHB SUSCEPTIBLE 3, AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, HOPW1-1-INTERACTING 3, T22N19.5, WIN3
• Chromosome Location: Chr.5: 4267456 - 4271064 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PBS3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001343268.1	NP_001330075.1	4 - 5	1526		90
	NM_001343269.1	NP_001330076.1	3 - 4	1539		90
	NM_121335.4	NP_196836.1	4 - 5	1316		90
GenBank mRNA	EU214910.1	-	3 - 4	1169		90

More Information

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Gene Ontology Categories:

Process(es)

defense response
defense response to bacterium, incompatible interaction
salicylic acid mediated signaling pathway
regulation of systemic acquired resistance
detection of fungus
benzoate metabolic process
positive regulation of plant-type hypersensitive response
defense response to bacterium
interspecies interaction between organisms
cellular response to hypoxia

Function(s)

acid-amino acid ligase activity
4-aminobenzoate amino acid synthetase activity
benzoate amino acid synthetase activity
vanillate amino acid synthetase activity
4-hydroxybenzoate amino acid synthetase activity