At02236985_g1 Best Coverage

• Gene Symbol: IBM1
• Gene Name: Transcription factor jumonji (jmjC) domain-containing protein
• Gene Aliases: AT3G07610, increase in bonsai methylation 1
• Chromosome Location: Chr.3: 2425884 - 2433113 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: IBM1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001084652.2	NP_001078121.1	3 - 4	920		72
	NM_001202909.1	NP_001189838.1	3 - 4	735		72
	NM_111640.2	NP_187418.1	3 - 4	920		72

More Information

• Set Membership: Amplicon length between 71 and 85, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

pollen development
flower development
regulation of gene expression
DNA methylation on cytosine
histone H3-K9 demethylation
leaf development
negative regulation of gene silencing
production of siRNA involved in chromatin silencing by small RNA
RNA-directed DNA methylation

Function(s)

chromatin DNA binding
histone demethylase activity (H3-K9 specific)