At02265899_g1 Best Coverage

• Gene Symbol: PHYA
• Gene Name: phytochrome A
• Gene Aliases: AT1G09570, ELONGATED HYPOCOTYL 8, F14J9.23, F14J9_23, FAR RED ELONGATED 1, FAR RED ELONGATED HYPOCOTYL 2, FHY2, FRE1, HY8, phytochrome A
• Chromosome Location: Chr.1: 3095160 - 3100819 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PHYA
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001123784.1	NP_001117256.1	4 - 5	3010		95
	NM_001331840.1	NP_001322906.1	3 - 4	3298		95
	NM_001331841.1	NP_001322909.1	3 - 4	3060		95
	NM_001331842.1	NP_001322908.1	3 - 4	3819		95
	NM_001331843.1	NP_001322907.1	3 - 4	3773		95
	NM_100828.4	NP_172428.1	3 - 4	3563		95
GenBank mRNA	AY039520.1	-	3 - 4	3010		95

More Information

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

histidine kinase receptor of two-component system

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
detection of visible light
red, far-red light phototransduction
gravitropism
phototropism
photomorphogenesis
red light signaling pathway
response to continuous far red light stimulus by the high-irradiance response system
response to very low fluence red light stimulus
response to far red light
protein-tetrapyrrole linkage
negative regulation of translation
response to arsenic-containing substance

Function(s)

phosphorelay sensor kinase activity
mRNA binding
protein kinase activity
protein histidine kinase activity
protein binding
red or far-red light photoreceptor activity
far-red light photoreceptor activity
identical protein binding
protein homodimerization activity