At02547535_s1 Best Coverage

• Gene Symbol: RHA1
• Gene Name: winged-helix DNA-binding transcription factor family protein
• Gene Aliases: AT-HSFA4C, AT5G45710, HEAT SHOCK TRANSCRIPTION FACTOR A4C, HEAT SHOCK TRANSCRIPTION FACTOR A4C, HSFA4C, MRA19.11, MRA19_11, ROOT HANDEDNESS 1
• Chromosome Location: Chr.5: 18540665 - 18542864 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: RHA1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001344637.1	NP_001331800.1	2	1863		119
	NM_001344638.1	NP_001331801.1	2	1858		119
	NM_123938.4	NP_199383.1	3	1657		119
	NM_203162.2	NP_974891.1	2	1555		119
GenBank mRNA	AK229058.1	-	3	1470		119

More Information

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Recommended Assay, Arabidopsis thaliana, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter
response to heat
response to auxin
positive gravitropism
cellular response to heat
root development
lateral root development
fruit morphogenesis

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcription factor activity, sequence-specific DNA binding