Ce02417289_g1

Gene Symbol:

chp-1 pas-3 spe-5

Gene Name:

CHORD Protein

Proteasome subunit alpha type-4

Vacuolar proton pump subunit B

Gene Aliases:

CELE_Y110A7A.13

CELE_Y110A7A.14

CELE_Y110A7A.12

Chromosome Location:

Chr.I: 5103581 - 5106049 on Build WBcel235

Chromosome Location:

Chr.I: 5103612 - 5106048 on Build WBcel235

Chromosome Location:

Chr.I: 5101665 - 5104913 on Build WBcel235

Species:

Caenorhabditis elegans

Species Specific ID (Flybase ID):

-

-

-

Assay Details

Gene Symbol: chp-1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_059118.6	NP_491519.1	2 - 3	1162		104
GenBank mRNA	AF192264.1	-	1 - 2	71		104

Gene Symbol: pas-3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001383045.1		2 - 3	1161		104

Gene Symbol: spe-5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_059117.3	NP_491518.1	1 - 2	72		104

More Information

Additional Information:

This assay is in the 5'UTR region of the NM_059117.3 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Caenorhabditis elegans, Probe spans exons

Gene Ontology Categories:

Process(es)

centrosome duplication
proteolysis
ubiquitin-dependent protein catabolic process
proteasomal protein catabolic process
proteasomal ubiquitin-independent protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
proteolysis involved in cellular protein catabolic process
ion transport
positive regulation of programmed cell death
ATP metabolic process
hydrogen ion transmembrane transport

Function(s)

zinc ion binding
endopeptidase activity
threonine-type endopeptidase activity
peptidase activity
hydrolase activity
ATP binding