Ce02421918_m1

Gene Symbol:

crn-3 algn-9

Gene Name:

protein-coding

Alpha-1,2-mannosyltransferase algn-9

Gene Aliases:

CELE_C14A4.4

CELE_C14A4.3

Chromosome Location:

Chr.II: 10586383 - 10592656 on Build WBcel235

Chromosome Location:

Chr.II: 10584336 - 10592642 on Build WBcel235

Species:

Caenorhabditis elegans

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: crn-3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001381579.1	NP_001367040.1	1 - 2	222		66
	NM_001383937.1		3 - 4	1541		66
GenBank mRNA	AY303577.1	-	1 - 2	240		66

Gene Symbol: algn-9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_063881.6	NP_496282.2	6 - 7	2370		66

More Information

• Set Membership: Amplicon length less than or equal to 70, Caenorhabditis elegans, Probe spans exons

Gene Ontology Categories:

Process(es)

exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
nucleobase-containing compound metabolic process
apoptotic DNA fragmentation
RNA processing
embryo development ending in birth or egg hatching
apoptotic cell clearance
cellular metabolic process
nuclear polyadenylation-dependent rRNA catabolic process
nuclear polyadenylation-dependent snoRNA catabolic process
nuclear polyadenylation-dependent snRNA catabolic process
nuclear polyadenylation-dependent tRNA catabolic process
nuclear polyadenylation-dependent CUT catabolic process
nuclear polyadenylation-dependent antisense transcript catabolic process
histone mRNA catabolic process
nuclear retention of unspliced pre-mRNA at the site of transcription
polyadenylation-dependent snoRNA 3'-end processing
protein glycosylation
protein N-linked glycosylation
mannosylation

Function(s)

nucleotide binding
3'-5'-exoribonuclease activity
nucleic acid binding
single-stranded RNA binding
catalytic activity
3'-5' exonuclease activity
alpha-1,2-mannosyltransferase activity
mannosyltransferase activity
transferase activity
transferase activity, transferring glycosyl groups
dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity