Cf02625134_g1 Best Coverage

• Gene Symbol: SOX9
• Gene Name: SRY-box transcription factor 9
• Gene Aliases: -
• Chromosome Location: Chr.9: 8275049 - 8278172 on Build CanFam3.1
• Species: Dog
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SOX9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001002978.1	NP_001002978.1		683		103
GenBank mRNA	AY237827.1	-		683		103

More Information

Additional Information:

This assay maps with 100% identity to the human homologue, and the human gene symbol was added in the Alias field to assist with searches.

• Set Membership: Amplicon length greater than or equal to 101, Recommended Assay, Canis familiaris

Gene Ontology Categories:

Process(es)

skeletal system development
cartilage condensation
cell fate specification
epithelial to mesenchymal transition
tissue homeostasis
positive regulation of protein phosphorylation
hair follicle development
positive regulation of mesenchymal cell proliferation
chondrocyte differentiation
negative regulation of immune system process
heart valve development
heart valve morphogenesis
endocardial cushion morphogenesis
chondrocyte differentiation involved in endochondral bone morphogenesis
chondrocyte hypertrophy
growth plate cartilage chondrocyte growth
nucleosome assembly
chromatin remodeling
signal transduction
epidermal growth factor receptor signaling pathway
spermatogenesis
positive regulation of cell proliferation
regulation of cell cycle process
positive regulation of gene expression
positive regulation of epithelial cell migration
neural crest cell fate specification
positive regulation of phosphatidylinositol 3-kinase signaling
male germ-line sex determination
cAMP-mediated signaling
negative regulation of ossification
positive regulation of epithelial cell differentiation
otic vesicle formation
negative regulation of chondrocyte differentiation
positive regulation of chondrocyte differentiation
somatic stem cell population maintenance
regulation of cell proliferation
regulation of apoptotic process
negative regulation of apoptotic process
protein kinase B signaling
negative regulation of myoblast differentiation
negative regulation of osteoblast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of fatty acid oxidation
negative regulation of photoreceptor cell differentiation
positive regulation of epithelial cell proliferation
negative regulation of epithelial cell proliferation
cartilage development
Sertoli cell differentiation
retina development in camera-type eye
retinal rod cell differentiation
epithelial cell proliferation involved in prostatic bud elongation
intestinal epithelial structure maintenance
regulation of cell proliferation involved in tissue homeostasis
regulation of cartilage development
morphogenesis of a branching epithelium
protein-containing complex assembly
negative regulation of biomineral tissue development
ERK1 and ERK2 cascade
response to fatty acid
cellular response to mechanical stimulus
cellular response to epidermal growth factor stimulus
cellular response to heparin
cellular response to BMP stimulus
renal vesicle induction
metanephric nephron tubule formation
negative regulation of canonical Wnt signaling pathway
cochlea morphogenesis
positive regulation of kidney development
positive regulation of branching involved in ureteric bud morphogenesis
positive regulation of male gonad development
positive regulation of mesenchymal stem cell differentiation

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
sequence-specific DNA binding