Dm01820496_m1 Best Coverage

• Gene Symbol: pan
• Gene Name: pangolin
• Gene Aliases: CG17964, CG32005, CG34403, DTCF, DTcf, Dm Pan, Dmel\CG34403, Dmel_CG34403, IA5, LEF, LEF-1, LEF/TCF, LEF/TCF-1, LEF1, LEF1/TCF, Lef, Lef1, PAN, Pan, TCF, TCF/LEF, TCF/LEF1, TCF/Pan, Tcf, Tcf-1, Tcf/LEF, d-TCF, dTCF, dTcf, l(4)102ABb, l(4)13, lef1, pan.dTCF, tcf
• Chromosome Location: Chr.4: 69326 - 114270 on Build Release_6_plus_ISO1_MT
• Species: Drosophila melanogaster
• Species Specific ID (Flybase ID): FBgn0085432

Assay Details

Gene Symbol: pan
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001014685.3	NP_001014685.1	6 - 7	1118		74
	NM_001038709.3	NP_001033798.1	6 - 7	1118		74
	NM_001258476.2	NP_001245405.1	6 - 7	1118		74
	NM_001258477.2	NP_001245406.1	5 - 6	859		74
	NM_079880.6	NP_524619.3	6 - 7	986		74
	NM_166718.3	NP_726522.1	5 - 6	727		74
	NM_166720.3	NP_726524.1	5 - 6	693		74
	NM_166723.3	NP_726527.2	6 - 7	1118		74
GenBank mRNA	BT021431.1	-	6 - 7	1051		74
	BT053747.1	-	5 - 6	595		74
	U88538.1	-	5 - 6	652		74
	Y09125.1	-		834		74

More Information

• Set Membership: Amplicon length between 71 and 85, Recommended Assay, Drosophila melanogaster

Panther Classification:

Molecular Function -

DNA-binding transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
segment polarity determination
salivary gland morphogenesis
imaginal disc-derived wing morphogenesis
mesodermal cell fate determination
heart development
embryonic pattern specification
positive regulation of gene expression
Wnt signaling pathway
spiracle morphogenesis, open tracheal system
chitin-based larval cuticle pattern formation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
canonical Wnt signaling pathway
regulation of stem cell proliferation
cell elongation involved in imaginal disc-derived wing morphogenesis

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
protein binding
beta-catenin binding
kinase binding
repressing transcription factor binding