Dm01838133_g1 Best Coverage

• Gene Symbol: Upf1
• Gene Name: Upf1 RNA helicase
• Gene Aliases: CG1559, Dm-Upf1, DmUpf1, Dmel\CG1559, Dmel_CG1559, UPF1, Upf1p, smg-2, upf1
• Chromosome Location: Chr.X: 11899996 - 11905371 on Build Release_6_plus_ISO1_MT
• Species: Drosophila melanogaster
• Species Specific ID (Flybase ID): FBgn0030354

Assay Details

Gene Symbol: Upf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001298216.1	NP_001285145.1	2 - 3	543		68
	NM_132539.3	NP_572767.1	2 - 3	572		68
GenBank mRNA	AY061379.1	-	2 - 3	541		68

More Information

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Drosophila melanogaster

Gene Ontology Categories:

Process(es)

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
RNA interference
gene silencing by miRNA
cellular response to hypoxia
positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Function(s)

DNA binding
RNA binding
RNA helicase activity
ATP binding
zinc ion binding