Dm02134555_g1 Best Coverage

• Gene Symbol: pnr
• Gene Name: pannier
• Gene Aliases: CG3978, CG3978-PA, Dmel\CG3978, Dmel_CG3978, GATA, GATA4, GATAa, GATAa/Pannier, PNR, Pnr, dGATAa, dGATAa/pannier, l(3)89B3, prn
• Chromosome Location: Chr.3R: 16026079 - 16041796 on Build Release_6_plus_ISO1_MT
• Species: Drosophila melanogaster
• Species Specific ID (Flybase ID): FBgn0003117

Assay Details

Gene Symbol: pnr
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001275691.2	NP_001262620.1	3 - 4	1409		61
	NM_001275692.2	NP_001262621.1	3 - 4	1657		61
	NM_057337.3	NP_476685.1	3 - 4	1418		61
	NM_169697.3	NP_732102.1	3 - 4	1484		61
GenBank mRNA	BT031157.1	-	3 - 4	1416		61
	BT053737.1	-	3 - 4	1481		61

More Information

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Drosophila melanogaster

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
positive regulation of antibacterial peptide biosynthetic process
blastoderm segmentation
cardioblast cell fate determination
cardioblast differentiation
chaeta development
embryonic heart tube development
cardiocyte differentiation
pigment metabolic process
cell fate commitment
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
lymph gland development
heart contraction
pericardial nephrocyte differentiation

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
RNA polymerase II transcription factor binding
RNA polymerase II repressing transcription factor binding
protein binding
zinc ion binding
protein heterodimerization activity