Dr03079987_m1 Best Coverage

• Gene Symbol: raraa
• Gene Name: retinoic acid receptor, alpha a
• Gene Aliases: etID309833.12, rara, rara2a, zRAR, zRAR-alpha, zgc:109797
• Chromosome Location: Chr.12: 10833055 - 11157495 on Build GRCz11
• Species: Zebrafish
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: raraa
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_131406.2	NP_571481.2	5 - 6	1405		66
	XM_005156052.4	XP_005156109.1	7 - 8	1389		66
GenBank mRNA	BC092692.1	-	5 - 6	1405		66
	KF148618.1	-	5 - 6	1023		66
	L03398.1	-	5 - 6	887		66
	S74155.1	-	5 - 6	976		66

More Information

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Danio rerio, Probe spans exons

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
liver development
regulation of transcription, DNA-templated
hormone-mediated signaling pathway
hindbrain morphogenesis
cell differentiation
response to retinoic acid
positive regulation of transcription from RNA polymerase II promoter
retinoic acid receptor signaling pathway

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
zinc ion binding
sequence-specific DNA binding
metal ion binding