Dr03094546_m1 Best Coverage

• Gene Symbol: shmt1
• Gene Name: serine hydroxymethyltransferase 1 (soluble)
• Gene Aliases: zgc:66171, zgc:77524
• Chromosome Location: Chr.3: 40260974 - 40276034 on Build GRCz11
• Species: Zebrafish
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: shmt1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_201046.1	NP_957340.1	6 - 7	659		79
GenBank mRNA	AY850381.1	-	5 - 6	592		79
	BC055527.1	-	6 - 7	659		79
	BC066496.1	-	6 - 7	646		79

More Information

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Danio rerio, Probe spans exons

Panther Classification:

Molecular Function -

methyltransferase

Gene Ontology Categories:

Process(es)

glycine metabolic process
L-serine catabolic process
one-carbon metabolic process
purine nucleobase biosynthetic process
glycine biosynthetic process from serine
methylation
tetrahydrofolate interconversion
tetrahydrofolate metabolic process
folic acid metabolic process
protein homotetramerization
cellular response to tetrahydrofolate

Function(s)

translation repressor activity, nucleic acid binding
catalytic activity
glycine hydroxymethyltransferase activity
methyltransferase activity
zinc ion binding
amino acid binding
transferase activity
pyridoxal phosphate binding
protein homodimerization activity
mRNA 5'-UTR binding
cobalt ion binding
serine binding