Dr03986683_uH Best Coverage

• Gene Symbol: msx1a
• Gene Name: muscle segment homeobox 1a
• Gene Aliases: cb435, id:ibd5099, msh-E, mshE, msx1, msxe, zgc:111928
• Chromosome Location: Chr.14: 10906 - 12794 on Build GRCz11
• Species: Zebrafish
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: msx1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_131273.1	NP_571348.1	1	256		87
GenBank mRNA	BC095601.1	-	1	284		113
	BC162283.1	-	1	309		87
	BC162290.1	-	1	309		87
	U50563.1	-	1	256		87

More Information

Additional Information:

This assay is in the 5'UTR region of the BC095601.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Danio rerio, Inventoried, Amplicon spans exons and probe does not span exons

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
otic placode formation
embryonic morphogenesis

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
sequence-specific DNA binding