Hs00226277_m1 Best Coverage

• Gene Symbol: RHBDF2
• Gene Name: rhomboid 5 homolog 2
• Gene Aliases: RHBDL5, RHBDL6, TEC, TOC, TOCG, iRhom2
• Chromosome Location: Chr.17: 76470893 - 76501440 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: RHBDF2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001005498.3	NP_001005498.2	11 - 12	1686		75
	NM_024599.5	NP_078875.4	12 - 13	1848		75
	XM_005257669.3	XP_005257726.1	12 - 13	2209		75
	XM_005257670.1	XP_005257727.1	12 - 13	1718		75
	XM_011525249.2	XP_011523551.1	12 - 13	3165		75
	XM_011525250.2	XP_011523552.1	13 - 14	1875		75
	XM_011525251.2	XP_011523553.1	12 - 13	1692		75
	XM_017025079.1	XP_016880568.1	12 - 13	2122		75
GenBank mRNA	AK025994.1	-	7 - 8	872		75
	AK074034.1	-	10 - 11	2153		75
	AK225684.1	-	7 - 8	825		75
	AK292135.1	-	12 - 13	1841		75
	AK292166.1	-	11 - 12	1641		75
	AL833680.1	-	6 - 7	741		75
	AY500247.1	-	11 - 12	1537		75
	BC016034.1	-	12 - 13	1828	3910543	75
	BC035829.1	-	7 - 8	934		75
	BE076010.1	-	3 - 4			75

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700011802.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17001899.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene RHBDF2

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Process(es)

protein transport
protein processing
regulation of epidermal growth factor receptor signaling pathway
regulation of protein secretion
negative regulation of protein secretion

Function(s)

serine-type endopeptidase activity
growth factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR17025782.hg.1	ENST00000313080.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17025782.hg.1	ENST00000389760.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17025782.hg.1	ENST00000389762.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17025782.hg.1	NM_001005498.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17025782.hg.1	NM_024599.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17025782.hg.1	TC17001899.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	ENST00000313080.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	ENST00000590168.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	ENST00000591885.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	NM_001005498.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	NM_024599.5	Refseq
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	ENST00000313080.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	ENST00000590168.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	ENST00000591885.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	NM_001005498.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	NM_024599.5	Refseq
Affymetrix Human Clariom D Assay	PSR1700196398.hg.1	TC1700011802.hg.1	Clariom D TC