Hs00375304_m1 Best Coverage

• Gene Symbol: OTOR
• Gene Name: otoraplin
• Gene Aliases: FDP, MIAL1
• Chromosome Location: Chr.20: 16748353 - 16752164 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: OTOR
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_020157.3	NP_064542.1	2 - 3	305		113
	XM_017027959.1	XP_016883448.1	2 - 3	281		113
GenBank mRNA	AF233261.1	-	2 - 3	300		113
	AF243505.1	-	2 - 3	263		113
	AJ242552.1	-	2 - 3	256		113
	AY359082.1	-	2 - 3	293		113
	BC101688.1	-	2 - 3	305	8069194	113
	BC101690.1	-	2 - 3	305	8069196	113

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000006782.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000105.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene OTOR

Gene Ontology Categories:

Process(es)

cartilage condensation
sensory perception of sound

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000490148.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000490148.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	ENST00000490148.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20001417.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20001417.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20001417.hg.1	NM_020157.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20001417.hg.1	TC20000105.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	TC2000006782.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2000146459.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000246081.2	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000486129.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000490148.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000490148.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	ENST00000490148.1	Ensembl
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq
Affymetrix Human Clariom D Assay	TC2000006782.hg.1	NM_020157.3	Refseq