Hs00418633_m1 Best Coverage

• Gene Symbol: SF3B3
• Gene Name: splicing factor 3b subunit 3
• Gene Aliases: RSE1, SAP130, SF3b130, STAF130
• Chromosome Location: Chr.16: 70523788 - 70577668 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SF3B3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_012426.4	NP_036558.3	18 - 19	2668		59
GenBank mRNA	AJ001443.1	-	18 - 19	2694		59
	AK001297.1	-	7 - 8	1047		59
	AK074933.1	-	12 - 13	1563		59
	AK291768.1	-	18 - 19	2666		59
	BC068974.1	-	18 - 19	2605	6168677	59
	D13642.1	-	1 - 2	139		59
	D87686.1	-	18 - 19	2613		59

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600008275.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000579.hg.1

Additional Information:

This assay is in the 5'UTR region of the D13642.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SF3B3

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
mRNA processing
protein complex assembly
RNA splicing
negative regulation of protein catabolic process

Function(s)

RNA binding
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000302516.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562722.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562874.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562874.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562874.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000562874.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000563739.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000563739.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000563739.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000563739.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000563739.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000563739.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000564899.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000564899.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000564899.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000565990.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000565990.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000565990.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000565990.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000565990.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000565990.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000566095.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000566095.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000566095.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000566095.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000566095.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000566095.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567250.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567635.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567654.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567654.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567654.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000567654.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568291.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568291.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568291.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568291.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568291.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568291.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568539.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568539.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568539.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000568539.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000569687.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000569687.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000569687.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000572365.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	ENST00000577085.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008275.hg.1	NM_012426.4	Refseq