Hs00858478_m1

• Gene Symbol: LINC00173
• Gene Name: long intergenic non-protein coding RNA 173
• Gene Aliases: NCRNA00173
• Chromosome Location: Chr.12: 116533422 - 116536513 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00173
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027346.1		1 - 2	180		119
GenBank mRNA	BC038547.1	-	1 - 2	180		119

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BI837301.1	-	1 - 2	183		Chr. 12 - 116533447 - 116536513 [+] on Build GRCh38	119

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 4472-2	MIR4472-2		-105.1kb	Anti-sense	Chr. 12 - 116428252 - 116428318 on NCBI Build GRCh38
Downstream	microtubule associated protein 1 light chain 3 beta 2	MAP1LC3B2	ATG8G	23.0kb	Sense	Chr. 12 - 116559208 - 116576620 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200012711.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000912.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000480237.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000480237.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000480237.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000489452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	ENST00000489452.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027345.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027345.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027345.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12011911.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12011911.hg.1	NR_027346.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12011911.hg.1	TC12000912.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12011907.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12011907.hg.1	NR_027346.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12011907.hg.1	TC12000912.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200201719.hg.1	TC1200012711.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000477702.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000480237.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000480237.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000480237.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000489452.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	ENST00000489452.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027345.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027345.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027345.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	TC1200012711.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	ENST00000489452.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	ENST00000470091.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	ENST00000489452.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	NR_027346.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200201712.hg.1	TC1200012711.hg.1	Clariom D TC