Hs00863329_g1

• Gene Symbol: C1GALT1
• Gene Name: core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
• Gene Aliases: C1GALT, T-synthase
• Chromosome Location: Chr.7: 7182547 - 7248651 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: C1GALT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_020156.4	NP_064541.1	3 - 4	1116		149
	XM_005249812.1	XP_005249869.1	3 - 4	1184		149
	XM_011515453.2	XP_011513755.1	4 - 5	1313		149
	XM_011515455.2	XP_011513757.1	4 - 5	1235		149
	XM_011515456.2	XP_011513758.1	3 - 4	1047		149
	XM_017012442.1	XP_016867931.1	4 - 5	1235		149
	XM_017012443.1	XP_016867932.1	4 - 5	1230		149
	XM_017012444.1	XP_016867933.1	5 - 6	1221		149
	XM_017012445.1	XP_016867934.1	6 - 7	1436		149
	XM_017012446.1	XP_016867935.1	3 - 4	1065		149
	XM_017012447.1	XP_016867936.1	4 - 5	1159		149
	XM_017012448.1	XP_016867937.1	3 - 4	1070		149
	XM_017012449.1	XP_016867938.1	2 - 3	1527		149
GenBank mRNA	AF155582.1	-	2 - 3	955		149
	AJ243256.1	-	2 - 3	893		149
	AJ278960.1	-	2 - 3	893		149
	BC003174.1	-	1 - 2	660		149

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700006662.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000075.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene C1GALT1

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

angiogenesis
kidney development
O-glycan processing
O-glycan processing, core 1
intestinal epithelial cell development

Function(s)

protein binding
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000467716.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000467716.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000467716.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000476068.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000476068.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	ENST00000476068.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07001277.hg.1	TC07000075.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07001277.hg.1	ENST00000223122.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07001277.hg.1	ENST00000436587.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07001277.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000402468.3	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000419721.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000429911.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000467716.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000467716.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000467716.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000476068.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000476068.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	ENST00000476068.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	TC0700006662.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	PSR0700146096.hg.1	TC0700006662.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	ENST00000223122.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	ENST00000436587.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	NM_020156.4	Refseq
Affymetrix Human Clariom D Assay	PSR0700146094.hg.1	TC0700006662.hg.1	Clariom D TC