CTCF
Genomic Map
Back To TopAssay Details
| Gene Symbol: CTCF | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001191022.1 | NP_001177951.1 | 6 - 7 | 999 | 69 | |
| NM_006565.3 | NP_006556.1 | 8 - 9 | 1960 | 69 | ||
| XM_005255775.3 | XP_005255832.1 | 8 - 9 | 1960 | 69 | ||
| XM_017022868.1 | XP_016878357.1 | 8 - 9 | 1710 | 69 | ||
| XM_017022869.1 | XP_016878358.1 | 8 - 9 | 1709 | 69 | ||
| GenBank mRNA | AB209793.1 | - | 6 - 7 | 833 | 69 | |
| AK314804.1 | - | 8 - 9 | 1958 | 69 | ||
| BC014267.2 | - | 8 - 9 | 1794 | 3840827 | 69 | |
| BT009915.1 | - | 6 - 7 | 1516 | 69 | ||
| U25435.1 | - | 8 - 9 | 1807 | 69 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1600008166.hg.1This assay targets the same location as HTA transcript cluster(s) TC16000542.hg.1
Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Mammalian Gene Collection
Recommended Assay
Homo sapiens
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
DNA methylation
regulation of gene expression by genetic imprinting
transcription from RNA polymerase II promoter
chromosome segregation
maintenance of DNA methylation
positive regulation of gene expression
covalent chromatin modification
nucleosome positioning
regulation of histone methylation
regulation of histone acetylation
regulation of gene expression, epigenetic
regulation of molecular function, epigenetic
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of centromeric sister chromatid cohesion
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
protein binding
zinc ion binding
chromatin insulator sequence binding
sequence-specific DNA binding
transcription regulatory region DNA binding
negative regulation of transcription from RNA polymerase II promoter
DNA methylation
regulation of gene expression by genetic imprinting
transcription from RNA polymerase II promoter
chromosome segregation
maintenance of DNA methylation
positive regulation of gene expression
covalent chromatin modification
nucleosome positioning
regulation of histone methylation
regulation of histone acetylation
regulation of gene expression, epigenetic
regulation of molecular function, epigenetic
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of centromeric sister chromatid cohesion
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
protein binding
zinc ion binding
chromatin insulator sequence binding
sequence-specific DNA binding
transcription regulatory region DNA binding
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16007731.hg.1 | ENST00000264010.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR16007731.hg.1 | ENST00000401394.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR16007731.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16007731.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16007731.hg.1 | TC16000542.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | ENST00000566078.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008166.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | ENST00000264010.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | ENST00000401394.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | NM_001191022.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | NM_006565.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600160815.hg.1 | TC1600008166.hg.1 | Clariom D TC |
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