Hs00934682_m1

• Gene Symbol: GATA6
• Gene Name: GATA binding protein 6
• Gene Aliases: -
• Chromosome Location: Chr.18: 22169437 - 22202528 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: GATA6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005257.5	NP_005248.2	3 - 4	1587		69
GenBank mRNA	AK223547.1	-	2 - 3	1516		69
	D87811.1	-	2 - 3	1128		69
	U66075.1	-	2 - 3	1213		69
	X95701.1	-	3 - 4	1581		69

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800006852.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000094.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene GATA6

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
liver development
outflow tract septum morphogenesis
type B pancreatic cell differentiation
pancreatic A cell differentiation
transcription from RNA polymerase II promoter
phospholipid metabolic process
endodermal cell fate determination
blood coagulation
male gonad development
cardiac muscle hypertrophy in response to stress
positive regulation of BMP signaling pathway
negative regulation of transforming growth factor beta1 production
negative regulation of transforming growth factor beta2 production
tube morphogenesis
response to drug
negative regulation of apoptotic process
response to estrogen
cellular protein metabolic process
cell fate commitment
positive regulation of angiogenesis
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
cell development
organ formation
smooth muscle cell differentiation
positive regulation of cardioblast differentiation
cardiac muscle cell differentiation
positive regulation of cardiac muscle cell proliferation
lung saccule development
Clara cell differentiation
Type II pneumocyte differentiation
intestinal epithelial cell differentiation
cardiac vascular smooth muscle cell differentiation
response to growth factor
positive regulation of cell cycle arrest
cellular response to gonadotropin stimulus
cellular response to hypoxia
cellular response to BMP stimulus

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
RNA polymerase II transcription factor binding
RNA polymerase II repressing transcription factor binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
transcription factor binding
zinc ion binding
protein kinase binding
transcription regulatory region DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18001042.hg.1	ENST00000269216.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18001042.hg.1	NM_005257.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18001042.hg.1	TC18000094.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	TC1800006852.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	NM_005257.5	Refseq
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	TC1800006852.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	ENST00000269216.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	ENST00000581694.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1800146910.hg.1	NM_005257.5	Refseq