Assay Details

Gene Symbol: CNTN3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_020872.2	NP_065923.1	20 - 21	2846		121
	XM_005264757.3	XP_005264814.1	21 - 22	2956		121
	XM_011533768.2	XP_011532070.1	20 - 21	6478		121
	XM_017006507.1	XP_016861996.1	21 - 22	3526		121
	XM_017006508.1	XP_016861997.1	20 - 21	2751		121
	XM_017006509.1	XP_016861998.1	11 - 12	1525		121
GenBank mRNA	AB040929.1	-	18 - 19	2495		121
GenBank mRNA	BC150608.1	-	20 - 21	2846	9056978	121

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300011566.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001562.hg.1

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CNTN3

Gene Ontology Categories:

Function(s)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03028402.hg.1	TC03001562.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03028402.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03028402.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03028402.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03028401.hg.1	TC03001562.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03028401.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03028401.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03028401.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300186471.hg.1	TC0300011566.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	TC0300011566.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	ENST00000263665.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	ENST00000477856.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	NM_020872.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300186470.hg.1	TC0300011566.hg.1	Clariom D TC

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Genomic Map