Hs00985055_m1

• Gene Symbol: PTPN3
• Gene Name: protein tyrosine phosphatase, non-receptor type 3
• Gene Aliases: PTP-H1, PTPH1
• Chromosome Location: Chr.9: 109375694 - 109538395 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPN3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145368.1	NP_001138840.1	15 - 16	1556		102
	NM_001145369.1	NP_001138841.1	11 - 12	3740		102
	NM_001145370.1	NP_001138842.1	10 - 11	3605		102
	NM_001145371.1	NP_001138843.1	6 - 7	1174		102
	NM_001145372.1	NP_001138844.1	5 - 6	1039		102
	NM_002829.3	NP_002820.3	16 - 17	1691		102
	NR_026918.1		3 - 4	461		102
	XM_006717197.3	XP_006717260.1	16 - 17	1800		102
	XM_006717199.3	XP_006717262.1	16 - 17	1825		102
	XM_006717201.3	XP_006717264.1	15 - 16	1632		102
	XM_006717202.3	XP_006717265.1	13 - 14	1394		102
	XM_006717203.3	XP_006717266.1	13 - 14	1353		102
	XM_006717204.3	XP_006717267.1	16 - 17	1727		102
	XM_011518888.2	XP_011517190.1	16 - 17	1761		102
	XM_011518889.2	XP_011517191.1	16 - 17	2431		102
	XM_017014955.1	XP_016870444.1	16 - 17	1783		102
	XM_017014956.1	XP_016870445.1	14 - 15	1504		102
	XM_017014957.1	XP_016870446.1	15 - 16	1592		102
GenBank mRNA	AK295875.1	-	14 - 15	1476		102
	AK296265.1	-	5 - 6	823		102
	AK296388.1	-	7 - 8	1100		102
	AK303608.1	-	3 - 4	461		102
	AK304434.1	-	15 - 16	1556		102
	AK308349.1	-	3 - 4	424		102
	AK316066.1	-	15 - 16	1556		102
	AK316118.1	-	5 - 6	965		102
	BC126117.1	-	15 - 16	1601	8991833	102
	BC143848.1	-	14 - 15	1466	9052363	102
	BX648253.1	-	10 - 11	3606		102
	BX648735.1	-	11 - 12	2175		102
	CR749204.1	-	4 - 5	618		102
	DQ104439.1	-	15 - 16	1579		102
	M64572.1	-	15 - 16	1602		102
	S39392.1	-	8 - 9	1002		102

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011163.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001468.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK303608.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPN3

Gene Ontology Categories:

Process(es)

protein dephosphorylation
peptidyl-tyrosine dephosphorylation
negative regulation of mitotic cell cycle
negative regulation of membrane protein ectodomain proteolysis
liver regeneration
regulation of membrane depolarization during action potential
regulation of sodium ion transmembrane transporter activity

Function(s)

phosphotyrosine binding
protein tyrosine phosphatase activity
protein binding
cytoskeletal protein binding
sodium channel regulator activity
ATPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	TC09001468.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	ENST00000262539.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	ENST00000374541.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	ENST00000394827.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	ENST00000394831.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	ENST00000412145.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	ENST00000446349.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NM_001145368.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NM_001145369.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NM_001145370.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NM_001145371.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NM_001145372.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NM_002829.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09018154.hg.1	NR_026918.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000262539.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000374541.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000412145.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000446349.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145368.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145369.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145370.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145371.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145372.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_002829.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NR_026918.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000262539.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000374541.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000412145.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	ENST00000446349.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145368.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145369.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145370.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145371.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_001145372.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NM_002829.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	NR_026918.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900175955.hg.1	TC0900011163.hg.1	Clariom D TC