Hs00987953_m1

• Gene Symbol: CAST
• Gene Name: calpastatin
• Gene Aliases: BS-17, PLACK
• Chromosome Location: Chr.5: 96662037 - 96774683 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CAST
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001190442.1	NP_001177371.1	5 - 6	387		87
	XM_006714696.3	XP_006714759.1	6 - 7	490		87
	XM_006714697.3	XP_006714760.1	5 - 6	507		87
	XM_006714698.3	XP_006714761.1	5 - 6	507		87
	XM_006714699.3	XP_006714762.1	5 - 6	431		87
	XM_006714700.3	XP_006714763.1	5 - 6	507		87
	XM_006714702.3	XP_006714765.1	5 - 6	399		87
	XM_006714707.3	XP_006714770.1	3 - 4	253		87
	XM_006714708.3	XP_006714771.1	3 - 4	252		87
	XM_006714709.3	XP_006714772.1	3 - 4	233		87
	XM_011543654.2	XP_011541956.1	5 - 6	507		87
	XM_011543655.2	XP_011541957.1	5 - 6	507		87
	XM_017009911.1	XP_016865400.1	5 - 6	507		87
	XM_017009912.1	XP_016865401.1	6 - 7	518		87
	XM_017009913.1	XP_016865402.1	6 - 7	505		87
	XM_017009914.1	XP_016865403.1	5 - 6	507		87
	XM_017009917.1	XP_016865406.1	5 - 6	423		87
	XM_017009918.1	XP_016865407.1	5 - 6	507		87
	XM_017009919.1	XP_016865408.1	5 - 6	507		87
	XM_017009924.1	XP_016865413.1	5 - 6	507		87
	XM_017009927.1	XP_016865416.1	3 - 4	252		87
	XM_017009928.1	XP_016865417.1	3 - 4	290		87
	XM_017009930.1	XP_016865419.1	3 - 4	233		87
GenBank mRNA	AB026049.1	-	3 - 4	239		87
	AB208816.1	-	5 - 6	351		87
	AK297879.1	-	3 - 4	165		87
	AK298541.1	-	3 - 4	253		87
	AK299402.1	-	3 - 4	233		87
	BQ893654.1	-	5 - 6	330		87
	CD702474.1	-	3 - 4	284		87
	D16217.1	-	3 - 4	246		87
	M86258.1	-	2 - 3	84		87

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.
This assay is in the 5'UTR region of the AB026049.1,AK298541.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

Panther Classification:

Molecular Function -

protein-binding activity modulator, protease inhibitor

Gene Ontology Categories:

Process(es)

liver development
egg activation
brain development
myoblast fusion
aging
negative regulation of endopeptidase activity
organ regeneration
myoblast differentiation
negative regulation of cell cycle arrest
cell-cell adhesion
negative regulation of type B pancreatic cell apoptotic process

Function(s)

protease binding
endopeptidase inhibitor activity
protein binding
calcium-dependent cysteine-type endopeptidase inhibitor activity
poly(A) RNA binding
cadherin binding involved in cell-cell adhesion