Hs00998346_m1 Best Coverage

• Gene Symbol: NKAP
• Gene Name: NFKB activating protein
• Gene Aliases: -
• Chromosome Location: Chr.X: 119925050 - 119943772 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: NKAP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_024528.3	NP_078804.2	2 - 3	629		100
	XM_017029842.1	XP_016885331.1	2 - 3	166		100
GenBank mRNA	AK026279.1	-	2 - 3	629		100
	AL832118.1	-	4 - 5	570		100
	AY388958.1	-	2 - 3	629		100
	BC000940.2	-	2 - 3	510		100
	BC015354.1	-	2 - 3	493	3450847	100
	BC016783.1	-	2 - 3	497		100
	BC018968.1	-	2 - 3	600		100
	BC032442.1	-	2 - 3	487	5139142	100
	BC071686.1	-	2 - 3	608		100

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00011389.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X001318.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NKAP

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
Notch signaling pathway
stem cell population maintenance
granulocyte differentiation
T cell differentiation in thymus
negative regulation of transcription, DNA-templated
positive regulation of alpha-beta T cell differentiation
hematopoietic stem cell proliferation
positive regulation of protein targeting to mitochondrion

Function(s)

chromatin binding
protein binding
chromatin DNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR0X017706.hg.1	TC0X001318.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X017706.hg.1	ENST00000371410.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X017706.hg.1	ENST00000477789.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X017706.hg.1	NM_024528.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00178980.hg.1	ENST00000477789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00178980.hg.1	NM_024528.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00178980.hg.1	ENST00000477789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00178980.hg.1	NM_024528.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00178980.hg.1	TC0X00011389.hg.1	Clariom D TC