Hs01016677_m1

• Gene Symbol: CLSTN3
• Gene Name: calsyntenin 3
• Gene Aliases: CDHR14, CSTN3, alcbeta
• Chromosome Location: Chr.12: 7130371 - 7158945 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CLSTN3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014718.3	NP_055533.2	16 - 17	2801		127
	XM_006719163.3	XP_006719226.1	15 - 16	4127		127
GenBank mRNA	AB018269.1	-	15 - 16	3097		127
	AJ277460.1	-	16 - 17	2798		127
	AK299177.1	-	16 - 17	2775		127
	AK299246.1	-	7 - 8	1003		127
	AK316059.1	-	16 - 17	2801		127
	AY753302.1	-	15 - 16	2559		127
	BC104767.1	-	16 - 17	2605	8143770	127
	BC111491.1	-	16 - 17	2789	5213830	127
	BC112283.1	-	16 - 17	2617	8327751	127

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200006670.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000108.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CLSTN3

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

regulation of cell growth
homophilic cell adhesion via plasma membrane adhesion molecules
synapse assembly
synaptic transmission, glutamatergic
positive regulation of synaptic transmission
synaptic transmission, GABAergic
positive regulation of synapse assembly
positive regulation of protein localization to synapse

Function(s)

calcium ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12001484.hg.1	ENST00000266546.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12001484.hg.1	ENST00000331148.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12001484.hg.1	ENST00000537408.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12001484.hg.1	NM_014718.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12001484.hg.1	TC12000108.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000266546.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000331148.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000535313.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000537408.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	NM_014718.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000266546.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000331148.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000535313.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	ENST00000537408.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	NM_014718.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200146657.hg.1	TC1200006670.hg.1	Clariom D TC