Hs01018114_g1

• Gene Symbol: VPS41
• Gene Name: VPS41, HOPS complex subunit
• Gene Aliases: HVPS41, HVSP41, hVps41p
• Chromosome Location: Chr.7: 38722974 - 38909200 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VPS41
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014396.3	NP_055211.2	20 - 21	1762		78
	NM_080631.3	NP_542198.2	19 - 20	1687		78
	XM_017011988.1	XP_016867477.1	7 - 8	695		78
GenBank mRNA	AK074325.1	-	16 - 17	1475		78
	AK299143.1	-	17 - 18	1508		78
	AK314556.1	-	20 - 21	1762		78
	BC044851.1	-	20 - 21	1757	4822048	78
	BX648347.1	-	18 - 19	1487		78
	U87309.1	-	20 - 21	1765		78

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700010796.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001305.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VPS41

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein targeting to vacuole
autophagy
endosome to lysosome transport
endosomal vesicle fusion
regulation of SNARE complex assembly
vacuole fusion, non-autophagic
regulated exocytosis
late endosome to lysosome transport

Function(s)

protein binding
microtubule binding
zinc ion binding
identical protein binding
protein self-association
GTPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07020253.hg.1	TC07001305.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07020253.hg.1	ENST00000310301.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07020253.hg.1	ENST00000395969.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07020253.hg.1	NM_014396.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07020253.hg.1	NM_080631.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	ENST00000310301.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	ENST00000395969.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	NM_014396.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	NM_080631.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	ENST00000310301.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	ENST00000395969.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	NM_014396.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	NM_080631.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700176898.hg.1	TC0700010796.hg.1	Clariom D TC