Hs01022023_m1 Best Coverage

• Gene Symbol: GABPA
• Gene Name: GA binding protein transcription factor alpha subunit
• Gene Aliases: E4TF1-60, E4TF1A, NFT2, NRF2, NRF2A, RCH04A07
• Chromosome Location: Chr.21: 25734947 - 25772460 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: GABPA
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001197297.1	NP_001184226.1	9 - 10	1281		118
	NM_002040.3	NP_002031.2	9 - 10	1718		118
	XM_005260938.4	XP_005260995.1	9 - 10	1353		118
	XM_011529520.2	XP_011527822.1	10 - 11	1757		118
	XM_011529521.2	XP_011527823.1	11 - 12	1848		118
	XM_017028313.1	XP_016883802.1	9 - 10	1364		118
GenBank mRNA	AK223164.1	-	9 - 10	1320		118
	AK313545.1	-	9 - 10	1515		118
	BC035031.2	-	9 - 10	1351	5264778	118
	BX647755.1	-	9 - 10	1659		118
	D13318.1	-	9 - 10	1323		118
	EU159453.1	-	8 - 9	1140		118
	JQ313900.1	-	8 - 9	1131		118
	U13044.1	-	9 - 10	1316		118

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100006787.hg.1
This assay targets the same location as HTA transcript cluster(s) TC21000078.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Homo sapiens, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene GABPA

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
transcription from RNA polymerase II promoter
mitochondrion organization
cell differentiation
negative regulation of megakaryocyte differentiation
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription coactivator activity
protein binding
transcription regulatory region DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21000431.hg.1	ENST00000354828.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21000431.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21000431.hg.1	NM_001197297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21000431.hg.1	NM_002040.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21000431.hg.1	TC21000078.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	TC2100006787.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100145802.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	TC2100006787.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100145803.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000354828.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000400075.3	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	ENST00000487266.1	Ensembl
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_001197297.1	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq
Affymetrix Human Clariom D Assay	TC2100006787.hg.1	NM_002040.3	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	167077	-	-
ABI Human Genome Survey Microarray Version 2.0	226728	-	-