Hs01026883_m1

• Gene Symbol: KDM4A
• Gene Name: lysine demethylase 4A
• Gene Aliases: JHDM3A, JMJD2, JMJD2A, TDRD14A
• Chromosome Location: Chr.1: 43650118 - 43705518 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: KDM4A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_014663.2	NP_055478.2	3 - 4	470		86
	XM_005271354.3	XP_005271411.1	3 - 4	507		86
	XM_005271355.3	XP_005271412.1	3 - 4	425		86
	XM_005271356.3	XP_005271413.1	4 - 5	546		86
	XM_017002912.1	XP_016858401.1	4 - 5	615		86
GenBank mRNA	AB014577.1	-	3 - 4	429		86
	AK300039.1	-	3 - 4	462		86
	BC002558.2	-	3 - 4	438	3138875	86
	BP198064.1	-	3 - 4	470		86

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100008073.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000549.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_005271356.3,XM_017002912.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene KDM4A

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
negative regulation of autophagy
negative regulation of gene expression
cardiac muscle hypertrophy in response to stress
viral process
histone demethylation
negative regulation of transcription, DNA-templated
oxidation-reduction process
histone H3-K36 demethylation
negative regulation of histone H3-K9 trimethylation

Function(s)

protein binding
zinc ion binding
ubiquitin protein ligase binding
histone demethylase activity
methylated histone binding
histone demethylase activity (H3-K36 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01008869.hg.1	TC01000549.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01008869.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01008869.hg.1	ENST00000463151.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01008869.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01008870.hg.1	TC01000549.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01008870.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01008870.hg.1	ENST00000463151.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01008870.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000481296.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000481296.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000481296.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000472265.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000481296.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000481296.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000481296.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	TC0100008073.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100157137.hg.1	TC0100008073.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	ENST00000372396.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	ENST00000463151.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	ENST00000485249.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	NM_014663.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100157136.hg.1	TC0100008073.hg.1	Clariom D TC