Hs01039422_m1

• Gene Symbol: SLF2
• Gene Name: SMC5-SMC6 complex localization factor 2
• Gene Aliases: C10orf6, FAM178A
• Chromosome Location: Chr.10: 100910230 - 100965134 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SLF2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001136123.1	NP_001129595.1	15 - 16	3661		80
	NM_018121.3	NP_060591.3	15 - 16	3661		80
	XM_005269965.2	XP_005270022.1	15 - 16	3276		80
	XM_011539944.2	XP_011538246.1	15 - 16	6251		80
GenBank mRNA	AF460991.1	-	15 - 16	3661		80
	AK001374.1	-	10 - 11	1157		80
	AK292565.1	-	15 - 16	3278		80
	AL832343.1	-	15 - 16	3267		80
	BC030565.1	-	15 - 16	3251		80

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000008661.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000726.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SLF2

Gene Ontology Categories:

Process(es)

DNA repair
cellular response to DNA damage stimulus
positive regulation of protein complex assembly
positive regulation of maintenance of mitotic sister chromatid cohesion
protein localization to site of double-strand break
positive regulation of double-strand break repair

Function(s)

protein binding
ubiquitin protein ligase binding
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10008493.hg.1	ENST00000238961.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10008493.hg.1	ENST00000370269.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10008493.hg.1	NM_001136123.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10008493.hg.1	NM_018121.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10008493.hg.1	TC10000726.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	ENST00000238961.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	ENST00000370269.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	NM_001136123.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	NM_018121.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	ENST00000238961.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	ENST00000370269.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	NM_001136123.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	NM_018121.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000159091.hg.1	TC1000008661.hg.1	Clariom D TC