Hs01041813_m1

• Gene Symbol: USP40
• Gene Name: ubiquitin specific peptidase 40
• Gene Aliases: -
• Chromosome Location: Chr.2: 233475519 - 233566789 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: USP40
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_018218.2	NP_060688.1	17 - 18	2418		165
	XM_006712612.3	XP_006712675.1	17 - 18	2436		165
	XM_011511396.2	XP_011509698.1	17 - 18	2436		165
	XM_011511397.2	XP_011509699.1	18 - 19	2510		165
	XM_011511398.2	XP_011509700.1	17 - 18	2436		165
	XM_011511399.2	XP_011509701.1	16 - 17	2237		165
	XM_011511400.2	XP_011509702.1	16 - 17	2221		165
	XM_017004426.1	XP_016859915.1	18 - 19	2510		165
	XM_017004427.1	XP_016859916.1	11 - 12	1438		165
	XM_017004428.1	XP_016859917.1	17 - 18	2478		165
GenBank mRNA	AJ583821.2	-	17 - 18	2418		165
	AK001647.1	-	17 - 18	2380		165
	AK297821.1	-	11 - 12	1506		165

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200016093.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002882.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene USP40

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
protein deubiquitination

Function(s)

thiol-dependent ubiquitinyl hydrolase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02046395.hg.1	TC02002882.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02046395.hg.1	ENST00000251722.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02046395.hg.1	ENST00000427112.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02046395.hg.1	ENST00000450966.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02046395.hg.1	NM_018218.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000251722.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000427112.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000450966.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000483216.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	NM_018218.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000251722.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000427112.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000450966.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	ENST00000483216.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	NM_018218.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200218188.hg.1	TC0200016093.hg.1	Clariom D TC