Hs01048863_m1

• Gene Symbol: NFX1
• Gene Name: nuclear transcription factor, X-box binding 1
• Gene Aliases: NFX2, TEG-42, Tex42
• Chromosome Location: Chr.9: 33290417 - 33371163 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: NFX1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001318758.1	NP_001305687.1	21 - 22	3191		89
	NM_002504.5	NP_002495.2	21 - 22	3188		89
GenBank mRNA	AL832342.1	-	21 - 22	3074		89
	BC012151.1	-	21 - 22	3058	4558442	89
	U15306.1	-	20 - 21	2984		89

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900006970.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000140.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NFX1

Panther Classification:

Molecular Function -

zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
inflammatory response
viral process
negative regulation of MHC class II biosynthetic process

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcription factor activity, sequence-specific DNA binding
zinc ion binding
ligase activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09001603.hg.1	TC09000140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09001603.hg.1	ENST00000379540.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001603.hg.1	ENST00000463421.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001603.hg.1	ENST00000536210.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09001603.hg.1	NM_002504.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	ENST00000379540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	ENST00000463421.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	NM_002504.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	ENST00000379540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	ENST00000463421.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	NM_002504.5	Refseq
Affymetrix Human Clariom D Assay	PSR0900147329.hg.1	TC0900006970.hg.1	Clariom D TC