Hs01078518_m1

• Gene Symbol: HSPG2
• Gene Name: heparan sulfate proteoglycan 2
• Gene Aliases: HSPG, PLC, PRCAN, SJA, SJS, SJS1
• Chromosome Location: Chr.1: 21822232 - 21937297 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HSPG2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001291860.1	NP_001278789.1	75 - 76	10444		82
	NM_005529.6	NP_005520.4	75 - 76	10441		82
	XM_011541318.2	XP_011539620.1	80 - 81	10925		82
	XM_017001120.1	XP_016856609.1	76 - 77	10571		82
	XM_017001121.1	XP_016856610.1	75 - 76	10520		82
	XM_017001122.1	XP_016856611.1	75 - 76	10517		82
GenBank mRNA	AB209851.1	-	27 - 28	4181		82
	M85289.1	-	75 - 76	10441		82
	X62515.1	-	75 - 76	10407		82

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100013229.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002328.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HSPG2

Gene Ontology Categories:

Process(es)

retinoid metabolic process
angiogenesis
glycosaminoglycan biosynthetic process
glycosaminoglycan catabolic process
extracellular matrix disassembly
extracellular matrix organization
glycosaminoglycan metabolic process
lipoprotein metabolic process
cellular protein metabolic process

Function(s)

calcium ion binding
protein binding
protein C-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01035866.hg.1	TC01002328.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01035866.hg.1	ENST00000374695.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035866.hg.1	NM_005529.6	Refseq
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	ENST00000374676.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	ENST00000374695.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	ENST00000471322.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	NM_001291860.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	NM_005529.6	Refseq
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	ENST00000374676.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	ENST00000374695.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	ENST00000471322.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	NM_001291860.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	NM_005529.6	Refseq
Affymetrix Human Clariom D Assay	PSR0100198102.hg.1	TC0100013229.hg.1	Clariom D TC