Hs01078529_m1

• Gene Symbol: HSPG2
• Gene Name: heparan sulfate proteoglycan 2
• Gene Aliases: HSPG, PLC, PRCAN, SJA, SJS, SJS1
• Chromosome Location: Chr.1: 21822232 - 21937297 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HSPG2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001291860.1	NP_001278789.1	85 - 86	11750		85
	NM_005529.6	NP_005520.4	85 - 86	11747		85
	XM_011541318.2	XP_011539620.1	90 - 91	12231		85
	XM_017001120.1	XP_016856609.1	86 - 87	11877		85
	XM_017001121.1	XP_016856610.1	85 - 86	11826		85
	XM_017001122.1	XP_016856611.1	85 - 86	11823		85
GenBank mRNA	AB209851.1	-	37 - 38	5487		85
	BC109204.1	-	4 - 5	373		85
	M85289.1	-	85 - 86	11747		85
	X62515.1	-	85 - 86	11713		85

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100013229.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002328.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HSPG2

Gene Ontology Categories:

Process(es)

retinoid metabolic process
angiogenesis
glycosaminoglycan biosynthetic process
glycosaminoglycan catabolic process
extracellular matrix disassembly
extracellular matrix organization
glycosaminoglycan metabolic process
lipoprotein metabolic process
cellular protein metabolic process

Function(s)

calcium ion binding
protein binding
protein C-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01035849.hg.1	TC01002328.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01035849.hg.1	ENST00000374695.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035849.hg.1	ENST00000486901.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035849.hg.1	NM_005529.6	Refseq
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	ENST00000374695.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	ENST00000486901.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	NM_001291860.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	NM_005529.6	Refseq
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	ENST00000374695.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	ENST00000486901.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	NM_001291860.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	NM_005529.6	Refseq
Affymetrix Human Clariom D Assay	PSR0100198085.hg.1	TC0100013229.hg.1	Clariom D TC