Hs01105094_m1 Best Coverage

• Gene Symbol: ABCA7
• Gene Name: ATP binding cassette subfamily A member 7
• Gene Aliases: ABCA-SSN, ABCX, AD9
• Chromosome Location: Chr.19: 1040103 - 1065572 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ABCA7
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_019112.3	NP_061985.2	23 - 24	3452		152
	XM_006722616.1	XP_006722679.1	23 - 24	3439		152
	XM_006722617.2	XP_006722680.1	23 - 24	3439		152
	XM_006722618.2	XP_006722681.1	8 - 9	989		152
	XM_011527628.2	XP_011525930.1	23 - 24	3313		152
	XM_011527629.1	XP_011525931.1	23 - 24	3412		152
	XM_011527630.1	XP_011525932.1	23 - 24	3439		152
	XM_011527631.1	XP_011525933.1	23 - 24	3439		152
	XM_011527632.1	XP_011525934.1	19 - 20	2891		152
	XM_011527633.2	XP_011525935.1	23 - 24	3439		152
	XM_011527634.1	XP_011525936.1	23 - 24	3439		152
	XM_011527635.1	XP_011525937.1	23 - 24	3439		152
	XM_011527636.2	XP_011525938.1	8 - 9	987		152
	XM_017026142.1	XP_016881631.1	23 - 24	3439		152
	XM_017026143.1	XP_016881632.1	23 - 24	3439		152
GenBank mRNA	AB055390.1	-	17 - 18	2807		152
	AF250238.1	-	22 - 23	3221		152
	AF328787.1	-	22 - 23	3337		152

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900006508.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19000028.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Recommended Assay, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ABCA7

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter, primary active transporter, transporter

Gene Ontology Categories:

Process(es)

phagocytosis
memory
positive regulation of cholesterol efflux
phospholipid scrambling
peptide cross-linking
negative regulation of ATPase activity
positive regulation of ATPase activity
cholesterol efflux
phospholipid efflux
high-density lipoprotein particle assembly
protein localization to nucleus
apolipoprotein A-I-mediated signaling pathway
negative regulation of amyloid precursor protein biosynthetic process
positive regulation of phagocytosis
transmembrane transport
positive regulation of ERK1 and ERK2 cascade
positive regulation of beta-amyloid clearance
positive regulation of engulfment of apoptotic cell
negative regulation of beta-amyloid formation
positive regulation of phospholipid efflux

Function(s)

transporter activity
ATP binding
phospholipid transporter activity
ATPase activity
apolipoprotein A-I receptor activity
ATPase activity, coupled to transmembrane movement of substances

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19000286.hg.1	ENST00000263094.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19000286.hg.1	ENST00000433129.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19000286.hg.1	NM_019112.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19000286.hg.1	TC19000028.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	ENST00000263094.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	ENST00000433129.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	ENST00000435683.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	NM_019112.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	TC1900006508.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	ENST00000263094.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	ENST00000433129.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	ENST00000435683.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900144783.hg.1	NM_019112.3	Refseq