Hs01108953_m1

• Gene Symbol: DCAF1
• Gene Name: DDB1 and CUL4 associated factor 1
• Gene Aliases: VPRBP
• Chromosome Location: Chr.3: 51395867 - 51505620 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: DCAF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001171904.1	NP_001165375.1	24 - 25	4691		85
	NM_014703.2	NP_055518.1	25 - 26	4741		85
	XM_017007549.1	XP_016863038.1	26 - 27	4892		85
GenBank mRNA	AB018343.1	-	25 - 26	4724		85
	BC110371.1	-	24 - 25	4681	5547856	85

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300011135.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene DCAF1

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
viral process
protein ubiquitination
B cell differentiation
V(D)J recombination
cell competition in a multicellular organism
histone H2A-T120 phosphorylation

Function(s)

protein binding
ATP binding
histone kinase activity (H2A-T120 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	ENST00000423656.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	ENST00000504652.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	NM_001171904.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	ENST00000423656.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	ENST00000504652.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	NM_001171904.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182985.hg.1	TC0300011135.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	ENST00000335891.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	ENST00000423656.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	ENST00000504652.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	NM_001171904.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	ENST00000335891.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	ENST00000423656.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	ENST00000504652.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	NM_001171904.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182987.hg.1	TC0300011135.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	193295	-	-
ABI Human Genome Survey Microarray Version 2.0	217468	-	-