Hs01111948_m1

• Gene Symbol: HERC6
• Gene Name: HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
• Gene Aliases: -
• Chromosome Location: Chr.4: 88378565 - 88443097 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HERC6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001165136.1	NP_001158608.1	19 - 20	2628		145
	NM_017912.3	NP_060382.3	20 - 21	2736		145
	XM_005263083.3	XP_005263140.1	20 - 21	2933		145
	XM_011532053.2	XP_011530355.1	19 - 20	2827		145
	XM_017008333.1	XP_016863822.1	19 - 20	2294		145
GenBank mRNA	AF336798.1	-	20 - 21	2736		145
	AK000644.1	-	7 - 8	824		145
	AK097168.1	-	14 - 15	1551		145
	AK225506.1	-	7 - 8	824		145
	AK295832.1	-	20 - 21	2646		145
	AL833664.1	-	9 - 10	1064		145
	AY653201.1	-	19 - 20	2628		145
	AY653202.1	-	19 - 20	2540		145
	AY653203.1	-	17 - 18	2321		145
	BC035775.1	-	6 - 7	676		145
	BC042047.1	-	20 - 21	2612	5531519	145
	BX647121.1	-	20 - 21	2412		145

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400008105.hg.1
This assay targets the same location as HTA transcript cluster(s) TC04000484.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HERC6

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein polyubiquitination
hematopoietic progenitor cell differentiation
protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Function(s)

ubiquitin-protein transferase activity
ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	TC04000484.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	ENST00000264346.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	ENST00000380265.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	ENST00000438983.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	ENST00000511939.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	NM_001165136.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04007023.hg.1	NM_017912.3	Refseq
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000264346.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000273960.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000380265.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000506842.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	NM_001165136.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	NM_017912.3	Refseq
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000264346.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000273960.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000380265.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	ENST00000506842.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	NM_001165136.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	NM_017912.3	Refseq
Affymetrix Human Clariom D Assay	PSR0400155770.hg.1	TC0400008105.hg.1	Clariom D TC