Hs01556851_g1

• Gene Symbol: PRPF8
• Gene Name: pre-mRNA processing factor 8
• Gene Aliases: HPRP8, PRP8, PRPC8, RP13, SNRNP220
• Chromosome Location: Chr.17: 1650629 - 1684882 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PRPF8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006445.3	NP_006436.3	35 - 36	5737		79
GenBank mRNA	AF092565.1	-	35 - 36	5661		79
	AK058034.1	-	3 - 4	340		79
	AK296344.1	-	11 - 12	1833		79
	AY486134.1	-	7 - 8	1128		79
	AY486135.1	-	7 - 8	1125		79
	BC064370.1	-	35 - 36	5702	5587081	79

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700009394.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PRPF8

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
mRNA processing
RNA splicing
cellular response to lipopolysaccharide
cellular response to tumor necrosis factor

Function(s)

second spliceosomal transesterification activity
protein binding
U6 snRNA binding
U1 snRNA binding
U2 snRNA binding
U5 snRNA binding
poly(A) RNA binding
K63-linked polyubiquitin binding
pre-mRNA intronic binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1700171884.hg.1	ENST00000304992.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1700171884.hg.1	ENST00000572621.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700171884.hg.1	ENST00000304992.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1700171884.hg.1	ENST00000572621.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700171884.hg.1	TC1700009394.hg.1	Clariom D TC