Hs01559797_m1

• Gene Symbol: ARNTL
• Gene Name: aryl hydrocarbon receptor nuclear translocator like
• Gene Aliases: BMAL1, BMAL1c, JAP3, MOP3, PASD3, TIC, bHLHe5
• Chromosome Location: Chr.11: 13276613 - 13387268 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ARNTL
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001030272.2	NP_001025443.1	6 - 7	628		131
	NM_001030273.2	NP_001025444.1	7 - 8	699		202
	NM_001178.5	NP_001169.3	7 - 8	683		131
	NM_001297719.1	NP_001284648.1	7 - 8	683		131
	NM_001297722.1	NP_001284651.1	6 - 7	628		131
	NM_001297724.1	NP_001284653.1	7 - 8	692		195
	XM_006718233.3	XP_006718296.1	6 - 7	570		131
	XM_006718234.1	XP_006718297.1	7 - 8	636		202
	XM_011520105.2	XP_011518407.2	5 - 6	734		131
	XM_011520107.2	XP_011518409.2	5 - 6	729		131
	XM_011520108.1	XP_011518410.1	7 - 8	676		131
	XM_011520109.1	XP_011518411.1	5 - 6	431		131
	XM_011520110.1	XP_011518412.1	8 - 9	691		202
	XM_011520111.1	XP_011518413.1	6 - 7	506		202
	XM_011520112.2	XP_011518414.1	8 - 9	691		202
	XM_011520113.1	XP_011518415.1	8 - 9	691		202
	XM_017017738.1	XP_016873227.1	5 - 6	732		131
	XM_017017739.1	XP_016873228.1	5 - 6	728		131
	XM_017017740.1	XP_016873229.1	6 - 7	570		131
	XM_017017741.1	XP_016873230.1	5 - 6	431		131
	XM_017017742.1	XP_016873231.1	5 - 6	431		131
	XM_017017743.1	XP_016873232.1	5 - 6	431		131
	XM_017017744.1	XP_016873233.1	8 - 9	691		202
	XM_017017745.1	XP_016873234.1	7 - 8	636		202
	XM_017017746.1	XP_016873235.1	7 - 8	646		202
	XM_017017747.1	XP_016873236.1	6 - 7	506		202
	XM_017017748.1	XP_016873237.1	6 - 7	563		202
GenBank mRNA	AB000812.1	-	4 - 5	264		131
	AB000815.1	-	5 - 6	335		202
	AB000816.1	-	6 - 7	675		202
	AF044288.1	-	7 - 8	593		131
	AK095749.1	-	7 - 8	584		202
	AK291510.1	-	6 - 7	541		131
	AK315174.1	-	7 - 8	621		131
	BC016674.1	-	4 - 5	227	3921870	202
	BC031214.1	-	7 - 8	524	4793007	195
	BC041129.1	-	7 - 8	607	5753529	131
	D89722.1	-	4 - 5	240		202
	U60415.1	-	6 - 7	527		131

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100006899.hg.1

Additional Information:

This assay is in the 5'UTR region of the AB000815.1,AB000816.1,AK095749.1,BC016674.1,BC031214.1,D89722.1,NM_001030273.2,NM_001297724.1,XM_006718234.1,XM_011520110.1,XM_011520111.1,XM_011520112.2,XM_011520113.1,XM_017017744.1,XM_017017745.1,XM_017017746.1,XM_017017747.1,XM_017017748.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ARNTL

Panther Classification:

Molecular Function -

basic helix-loop-helix transcription factor

Gene Ontology Categories:

Process(es)

protein import into nucleus, translocation
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
circadian rhythm
negative regulation of TOR signaling
circadian regulation of gene expression
regulation of protein catabolic process
regulation of hair cycle
positive regulation of circadian rhythm
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of fat cell differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of neurogenesis
regulation of insulin secretion
regulation of cell cycle
response to redox state
maternal process involved in parturition
positive regulation of canonical Wnt signaling pathway
oxidative stress-induced premature senescence
regulation of type B pancreatic cell development
negative regulation of glucocorticoid receptor signaling pathway
regulation of cellular senescence
positive regulation of skeletal muscle cell differentiation

Function(s)

transcription regulatory region sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
core promoter sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II transcription factor binding
DNA binding
protein binding
aryl hydrocarbon receptor binding
bHLH transcription factor binding
sequence-specific DNA binding
protein heterodimerization activity
Hsp90 protein binding
repressing transcription factor binding
E-box binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000389707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000401424.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000403290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000403482.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000403510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000482049.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000497429.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000529388.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000529825.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000530357.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000533520.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001030272.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001030273.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001178.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001297719.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001297722.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001297724.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000389707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000401424.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000403290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000403482.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000403510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000482049.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000497429.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000529388.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000529825.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000530357.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	ENST00000533520.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001030272.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001030273.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001178.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001297719.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001297722.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	NM_001297724.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148566.hg.1	TC1100006899.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000389707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000401424.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000403290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000403482.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000403510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000482049.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000497429.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000529388.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000530357.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000533520.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001030272.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001030273.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001178.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001297719.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001297722.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001297724.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000389707.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000401424.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000403290.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000403482.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000403510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000482049.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000497429.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000529388.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000530357.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	ENST00000533520.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001030272.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001030273.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001178.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001297719.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001297722.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	NM_001297724.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100148567.hg.1	TC1100006899.hg.1	Clariom D TC