Hs01583921_m1

• Gene Symbol: PRPF40B
• Gene Name: pre-mRNA processing factor 40 homolog B
• Gene Aliases: HYPC
• Chromosome Location: Chr.12: 49622717 - 49644669 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PRPF40B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001031698.2	NP_001026868.2	18 - 19	1946		166
	XM_006719324.3	XP_006719387.1	17 - 18	3000		166
	XM_006719325.3	XP_006719388.1	17 - 18	3000		166
	XM_011538135.2	XP_011536437.1	17 - 18	3000		166
	XM_011538136.2	XP_011536438.1	17 - 18	3000		166
	XM_011538137.2	XP_011536439.1	16 - 17	2919		166
	XM_011538138.2	XP_011536440.1	16 - 17	2889		166
	XM_011538139.2	XP_011536441.1	18 - 19	1940		166
	XM_011538140.2	XP_011536442.1	18 - 19	1940		166
	XM_011538141.1	XP_011536443.1	17 - 18	1766		166
	XM_011538143.2	XP_011536445.1	17 - 18	1782		166
	XM_011538144.2	XP_011536446.1	16 - 17	1655		166
	XM_017019135.1	XP_016874624.1	17 - 18	1703		166
	XM_017019136.1	XP_016874625.1	16 - 17	1655		166
	XM_017019137.1	XP_016874626.1	16 - 17	1655		166
	XM_017019138.1	XP_016874627.1	17 - 18	3000		166
	XM_017019139.1	XP_016874628.1	13 - 14	1666		166
GenBank mRNA	AK027117.1	-	3 - 4	227		166
	AL137459.1	-	4 - 5	449		166
	BC031917.1	-	15 - 16	1542		166
	BC050398.2	-	18 - 19	1782		166
	BC067364.1	-	17 - 18	1767	6644672	166

More Information

Updated Mapping Information

This assay targets the same location as HTA transcript cluster(s) TC12000377.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PRPF40B

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome

Function(s)

RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12004684.hg.1	ENST00000261897.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004684.hg.1	ENST00000380281.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004684.hg.1	NM_001031698.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004684.hg.1	NM_012272.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004684.hg.1	TC12000377.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12004685.hg.1	ENST00000261897.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004685.hg.1	ENST00000380281.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004685.hg.1	NM_001031698.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004685.hg.1	NM_012272.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004685.hg.1	TC12000377.hg.1	HTA TC