Hs02559537_s1

• Gene Symbol: SMARCC2
• Gene Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
• Gene Aliases: BAF170, CRACC2, Rsc8
• Chromosome Location: Chr.12: 56161852 - 56189567 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SMARCC2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003075.3	NP_003066.2	27	3386		129
	XM_005269101.1	XP_005269158.1	28	3416		129
	XM_005269102.1	XP_005269159.1	28	3413		129
	XM_005269103.1	XP_005269160.1	27	3320		129
	XM_011538693.2	XP_011536995.1	27	3325		129
	XM_017019887.1	XP_016875376.1	26	3210		129
GenBank mRNA	AK315153.1	-	27	3283		129
	BC009067.1	-	6	1034		129
	BC026222.2	-	27	3305	4395012	129

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200010900.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12001597.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SMARCC2

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
nucleosome disassembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
covalent chromatin modification
regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment
ATP-dependent chromatin remodeling
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
transcription coactivator activity
protein binding
nucleosomal DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12021178.hg.1	ENST00000267064.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12021178.hg.1	ENST00000550164.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12021178.hg.1	NM_003075.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12021178.hg.1	TC12001597.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	ENST00000267064.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	ENST00000550164.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	NM_003075.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	ENST00000267064.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	ENST00000550164.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	NM_003075.4	Refseq
Affymetrix Human Clariom D Assay	PSR1200183878.hg.1	TC1200010900.hg.1	Clariom D TC