SNORD88A
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORD88A | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003067.1 | 1 | 44 | 91 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream |
small nucleolar RNA, C/D box 88B |
SNORD88B | HBII-180B | -314.0 | Sense | Chr. 19 - 50799029 - 50799125 on NCBI Build GRCh38 |
| Downstream |
small nucleolar RNA, C/D box 88C |
SNORD88C | HBII-180C | 2.8kb | Sense | Chr. 19 - 50802325 - 50802421 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1900011222.hg.1This assay targets the same location as HTA transcript cluster(s) TC19001756.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Chr array_18 19 21 | A_17_P31629288 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990639 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990643 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154556 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154558 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154560 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154559 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990636 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990634 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629290 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629297 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629300 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629299 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154561 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990641 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990631 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629301 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990632 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990635 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990642 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990637 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990633 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990638 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990640 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154557 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31629297 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990640 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17154560 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990637 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990642 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17154558 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990634 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990643 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31629299 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990636 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31629288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17154557 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990632 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990643 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629300 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154556 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990638 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990640 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990642 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990639 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629299 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990634 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154560 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154561 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629297 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990636 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990641 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154557 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629288 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990635 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990633 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990631 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154558 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10990637 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629301 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P17154559 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31629290 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990642 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990637 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17154560 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17154558 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31629297 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990634 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990636 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990640 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10990643 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P17154557 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31629288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31629299 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990637 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990675 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990680 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990654 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990656 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990673 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990667 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154557 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990660 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990666 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990650 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990636 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990632 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154566 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990669 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990671 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154558 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990664 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990634 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990642 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990677 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154560 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990641 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990648 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990639 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154569 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990652 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154563 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17154537 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10990659 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR19023901.hg.1 | ENST00000408314.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19023901.hg.1 | NR_003067.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19023901.hg.1 | TC19001756.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011222.hg.1 | ENST00000408314.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900011222.hg.1 | NR_003067.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900194303.hg.1 | ENST00000408314.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900194303.hg.1 | NR_003067.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900194303.hg.1 | TC1900011222.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1900194303.hg.1 | ENST00000408314.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900194303.hg.1 | NR_003067.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1900011222.hg.1 | ENST00000408314.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900011222.hg.1 | NR_003067.1 | Refseq |
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