Name: [Hs03309936_g1] [CHKB-AS1]
Creator: Thermo Fisher Scientific
Keywords: [CHKB-AS1] Assay, [CHKB antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: CHKB-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_021492.2		1 - 2	297		83
GenBank mRNA	BE393070.1	-	1 - 2	196		83
	BJ989458.1	-	1 - 2	178		83
	CR456603.1	-	1 - 2	297		83
	CR980518.1	-	1 - 2	201		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AW009350.1	-	1 - 2		Chr. 22 - 50583200 - 50583927 [-] on Build GRCh38	83
GenBankmRNA	HY094314.1	-	1 - 2	231	Chr. 22 - 50583093 - 50583836 [+] on Build GRCh38	83
GenBankmRNA	HY124358.1	-	1 - 2	200	Chr. 22 - 50583124 - 50583885 [+] on Build GRCh38	83
GenBankmRNA	AA479358.1	-	1 - 2		Chr. 22 - 50583217 - 50583876 [-] on Build GRCh38	83
GenBankmRNA	AA909475.1	-	1 - 2		Chr. 22 - 50583221 - 50583924 [-] on Build GRCh38	83
GenBankmRNA	BJ989459.1	-	1 - 2		Chr. 22 - 50583141 - 50583905 [-] on Build GRCh38	83
GenBankmRNA	AI769826.1	-	1 - 2		Chr. 22 - 50583189 - 50583877 [-] on Build GRCh38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	CHKB-CPT1B readthrough (NMD candidate)	CHKB-CPT1B	CHKL-CPT1B	-27.0	Anti-sense	Chr. 22 - 50568861 - 50582999 on NCBI Build GRCh38
Downstream	mitogen-activated protein kinase 8 interacting protein 2	MAPK8IP2	IB-2, IB2, JIP2, PRKM8IPL	16.8kb	Sense	Chr. 22 - 50600685 - 50613978 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200007820.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000432.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3369079	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3394489	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4411	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4412	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	20362	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	3169	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3369079	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3394489	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3369079	-	-
SurePrint G3 Human GE Microarray G4851A	A_33_P3394489	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551046	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551049	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551050	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551043	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551040	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32242453	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17299263	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551048	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551045	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551056	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32242440	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551057	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551051	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551052	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551055	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551055	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551056	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32242440	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P32242453	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551045	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551048	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551052	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551040	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551046	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P17299263	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551057	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551050	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551043	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551051	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P11551049	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P21355531	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P21355531	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551043	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551052	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551045	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17299263	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P17299262	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551056	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551054	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551040	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551051	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551048	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P11551046	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P21355531	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	238557_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22008173.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22008173.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22008173.hg.1	TC22000432.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22008174.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22008174.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22008174.hg.1	TC22000432.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22008175.hg.1	NR_021492.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22008175.hg.1	TC22000432.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2200155562.hg.1	TC2200007820.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200155562.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155562.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155562.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155562.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	TC2200007820.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155558.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200155563.hg.1	TC2200007820.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200155563.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155563.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155561.hg.1	TC2200007820.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200155561.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155561.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155561.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155561.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	TC2200007820.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155557.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	TC2200007820.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200155559.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000380711.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	ENST00000609758.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_021492.2	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_110536.1	Refseq
Affymetrix Human Clariom D Assay	TC2200007820.hg.1	NR_110536.1	Refseq
Human Genome U133 Plus 2.0 Array	238557_at	-	-
Human Genome U133 Plus 2.0 Array	238557_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	238557_at4	-	-
Human Genome U95 Set	85494_at	-	-
Human Genome U95 Set	85494_PM_at	-	-
Human Genome U133 Set	238557_at	-	-
Human Genome U133 Set	238557_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A020625	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A020625	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3236215	NR_021492.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3236215	BJ989458.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3236215	CR456603.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3236215	CR980518.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3236215	BE393070.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3236215	NR_021492.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3236215	BJ989458.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3236215	CR456603.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3236215	CR980518.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3236215	BE393070.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3236215	NR_021492.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3236215	BJ989458.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3236215	CR456603.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3236215	CR980518.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3236215	BE393070.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3236215	NR_021492.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3236215	BJ989458.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3236215	CR456603.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3236215	CR980518.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3236215	BE393070.1	human_transcriptome

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Catalog #	4426961
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Genomic Map